BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D01LP1|AL425843
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1356 1611 0.0
>3x_Contig1356
Length = 8043
Score = 1611 bits (812), Expect = 0.0
Identities = 820/824 (99%)
Strand = Plus / Plus
Query: 1 cagaaccgtgaacatccacgtgagtnccggcgtgaatagcctttgtagcaaacttatcag 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3178 cagaaccgtgaacatccacgtgagtaccggcgtgaatagcctttgtagcaaacttatcag 3237
Query: 61 ttggtaacaaacccatttcaaatatatcttattttcactttcttgtggaacttagaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3238 ttggtaacaaacccatttcaaatatatcttattttcactttcttgtggaacttagaacca 3297
Query: 121 gatacaactaaaattctacctgcgatgattagctatgattaanactaagaaagggtttaa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3298 gatacaactaaaattctacctgcgatgattagctatgattaaaactaagaaagggtttaa 3357
Query: 181 atagacagaatcagtataattaataggtaacgtttaattagaattaagttttcttatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3358 atagacagaatcagtataattaataggtaacgtttaattagaattaagttttcttatata 3417
Query: 241 tatcaaatgagttagaagaaccctcgagcattataaatcaactgtgcctccagaagttcc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3418 tatcaaatgagtaagaagaaccctcgagcattataaatcaactgtgcctccagaagttcc 3477
Query: 301 agttcttgcagatgcgagctcaaatgcaggaaagaaatgagagaactcagtgggaaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3478 agttcttgcagatgcgagctcaaatgcaggaaagaaatgagagaactcagtgggaaaaat 3537
Query: 361 tcgtttgtcattcgagacccaaaacgaagcagccaaagcagccttaccaaatccgcaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3538 tcgtttgtcattcgagacccaaaacgaagcagccaaagcagccttaccaaatccgcaatt 3597
Query: 421 ggaatcgaattcccttggcctttggatccatttctgtaagttgcctccctgtctgtcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3598 ggaatcgaattcccttggcctttggatccatttctgtaagttgcctccctgtctgtcact 3657
Query: 481 agagctgcctgtgtgtctgtwcaattgcacgtgaacatgcgatatcatcaacaaagcgcc 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3658 agagctgcctgtgtgtctgtacaattgcacgtgaacatgcgatatcatcaacaaagcgcc 3717
Query: 541 acatattttcatggaaaagaaatgagctccagaagacatagtagagccacagttgaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3718 acatattttcatggaaaagaaatgagctccagaagacatagtagagccacagttgaatag 3777
Query: 601 aaatttgtcatctcggcaagaggcggaataactagaaaaaataaataaataaacatcacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3778 aaatttgtcatctcggcaagaggcggaataactagaaaaaataaataaataaacatcacg 3837
Query: 661 tgattgatgtcacgtgattgttatatttacaactcaattgtatattgtcagccattacag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3838 tgattgatgtcacgtgattgttatatttacaactcaattgtatattgtcagccattacag 3897
Query: 721 acagtaggacagcgccgattatattttgagtaaaatcactgagtagtaatgtttttatta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3898 acagtaggacagcgccgattatattttgagtaaaatcactgagtagtaatgtttttatta 3957
Query: 781 ttatcagatatagatcctgtatactggtttgatgtagttgtaca 824
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3958 ttatcagatatagatcctgtatactggtttgatgtagttgtaca 4001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7122
Number of Sequences: 1807
Number of extensions: 7122
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)